{"id":2722,"date":"2024-08-28T12:42:42","date_gmt":"2024-08-28T03:42:42","guid":{"rendered":"https:\/\/www.hiro-clinic.or.jp\/nippt\/bone-dna\/"},"modified":"2024-10-07T17:22:07","modified_gmt":"2024-10-07T08:22:07","slug":"bone-dna","status":"publish","type":"post","link":"https:\/\/www.hiro-clinic.or.jp\/nippt\/bone-dna\/?lang=en","title":{"rendered":"Methods of DNA extraction from bone."},"content":{"rendered":"\n<p>The method of extracting DNA from bones is mainly used for ancient remains and forensic examination. This process needs to be carried out very carefully and the following steps are common<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">1. <strong>Sample preparation<\/strong><\/h3>\n\n\n\n<p>Bone DNA extraction is usually performed from relatively well preserved bone. The bone site chosen is generally a hard site (e.g. femur or tooth).This increases the likelihood of good DNA preservation.<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">2. <strong>Bone cleaning<\/strong><\/h3>\n\n\n\n<p>It is important to clean the bone surface as the sample may be contaminated from external sources. This involves a process of scraping or cleaning the bone surface to remove external tissue and contaminants. Scraping the surface usually removes external contaminants.<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">3. <strong>Bone crushing<\/strong><\/h3>\n\n\n\n<p>To extract the DNA, the bones are ground into a fine powder. This is done using a specialized grinder or mill. Crushing the bone makes it easier to access the inner tissue of the bone, which contains DNA.<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">4. <strong>Demineralization process<\/strong><\/h3>\n\n\n\n<p>Bone contains high levels of calcium, which must be removed in order to extract DNA. In the demineralization process, bone powder is soaked in an acidic solution (e.g. EDTA solution) to dissolve and remove the calcium. This facilitates the extraction of organic components (i.e. DNA) from the bone.<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">5. <strong>DNA extraction<\/strong><\/h3>\n\n\n\n<p>After demineralization, a common DNA extraction protocol is used to extract DNA. This is a process in which the bone powder is soaked in lysis buffer (a solution that destroys cells and releases DNA) to elute the DNA. Phenol-chloroform extraction or commercial DNA extraction kits are then used to recover the DNA in solution.<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">6. <strong>purification of DNA<\/strong><\/h3>\n\n\n\n<p>Extracted DNA may contain proteins and other impurities. To remove these impurities, the DNA is purified. Ethanol precipitation and silica-based columns are common methods of purification.<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">7. <strong>Amplification and analysis of DNA<\/strong><\/h3>\n\n\n\n<p>As the DNA obtained is often fragmented in minute quantities, PCR (polymerase chain reaction) is used to amplify specific DNA regions to an analyzable quantity. DNA sequencing and <a href=\"https:\/\/www.hiro-clinic.or.jp\/nippt\/accuracy\/\">STR<\/a> analysis are then used to identify individuals and confirm genetic relationships.<\/p>\n\n\n\n<h3 class=\"wp-block-heading\">Summary<\/h3>\n\n\n\n<p>The process of extracting DNA from bone requires a multi-step, careful process. This includes proper preparation of the sample, demineralization, extraction and purification of the DNA. The technique is widely used in archaeology, forensic science and even evolutionary biology.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>The method of extracting DNA from bones is mainly used for ancient remains and forens&#8230;<\/p>\n","protected":false},"author":5,"featured_media":3632,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_acf_changed":false,"footnotes":""},"categories":[33],"tags":[39],"class_list":{"0":"post-2722","1":"post","2":"type-post","3":"status-publish","4":"format-standard","5":"has-post-thumbnail","7":"category-genetic-testing-en","8":"tag-expert-en","9":"article"},"acf":[],"_links":{"self":[{"href":"https:\/\/www.hiro-clinic.or.jp\/nippt\/wp-json\/wp\/v2\/posts\/2722","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.hiro-clinic.or.jp\/nippt\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.hiro-clinic.or.jp\/nippt\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.hiro-clinic.or.jp\/nippt\/wp-json\/wp\/v2\/users\/5"}],"replies":[{"embeddable":true,"href":"https:\/\/www.hiro-clinic.or.jp\/nippt\/wp-json\/wp\/v2\/comments?post=2722"}],"version-history":[{"count":3,"href":"https:\/\/www.hiro-clinic.or.jp\/nippt\/wp-json\/wp\/v2\/posts\/2722\/revisions"}],"predecessor-version":[{"id":5532,"href":"https:\/\/www.hiro-clinic.or.jp\/nippt\/wp-json\/wp\/v2\/posts\/2722\/revisions\/5532"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/www.hiro-clinic.or.jp\/nippt\/wp-json\/wp\/v2\/media\/3632"}],"wp:attachment":[{"href":"https:\/\/www.hiro-clinic.or.jp\/nippt\/wp-json\/wp\/v2\/media?parent=2722"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.hiro-clinic.or.jp\/nippt\/wp-json\/wp\/v2\/categories?post=2722"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.hiro-clinic.or.jp\/nippt\/wp-json\/wp\/v2\/tags?post=2722"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}